In the following procedure, Sf9 cells are attacked with an extended recombinant virus stock allowing it to be analyzed 2-3 days later. The assays employed be determined by the nature in the protein being created. This protocol shows some suggested approaches but might be not comprehensive. Screening needs to be individually tailored towards the properties of the particular protein being overproduced as well as availability of recognition reagents.
Materials
Spodoptera frugiperda (Sf9) cells | TNM-FH insect medium (see recipe in with or without 10% fetal bovine serum (FBS) |
High-titer recombinant baculovirus stocks | Phosphate-buffered saline (PBS; APPENDIX 2) |
1× SDS sample buffer | 60-mm tissue culture plates |
27°C incubator (humidification optional) | 15-ml polypropylene centrifuge tubes |
Beckman GPR centrifuge with GH-3.7 rotor (or equivalent), 4°C | Boiling water bath or 100°C heating block |
Sonicator | Additional reagents for quantitating protein using the Bradford method and preparing insect cell cultures and viral stocks |
Prepare and Practice Cultures
1. Seed starting 2. 5 × 106 Sf9 cells into 60-mm structure culture plates that contain 3 ml TNM-FH insect medium with and also without 10% FBS.
Incubate 1 hr at 27°C to let cells to put.
(Prepare one plate for every viral stock to be tested and one plate as a possible uninfected control.)
2. Replace the medium with fresh TNM-FH/10% FBS method and add 0. 1 ml high-titer baculovirus stock into the appropriate plates during an MOI with 1 to 10. Incubate 3 days at 27°C.
3. Harvest cells simply by gently dislodging them in the plates, and move cells and customs medium to 15-ml polypropylene centrifuge tubes.
4. Centrifuge 10 min at 1000 × gary (2000 rpm in the GH-3. 7 rotor), 4°C.
With regard to secreted proteins
(1)Transfer the culture supernatants to help new tubes.
(2)Determine the protein concentrations in the supernatants using the Bradford method. Proceed to analysis (step 5).Supernatants can be frozen up to many months at −80°C.
With regard to intracellular proteins
(1)Toss the supernatants. Wash cells by resuspending the actual cell pellets lightly in PBS,centrifuging again such as step 4, then discarding the supernatants.
(2)Add 500 µl of 1× SDS test buffer to every single pellet and disect 5 to EIGHT min by putting the tube in the boiling water bath tub or 100°C home heating block.
Sonicate samples once they are too viscous because of the presence of DNA.
Always sonicate until viscosity clears, then determine the actual protein concentration inside each sample with the Bradford method.
Proceed to analysis (step 5).
Analyze Proteins
5. Analyze the proteins with each sample by on the list of following methods.
a. Immunoblotting Load 20 to help 40 µg full cell protein per lane for a one-dimensional SDS-polyacrylamide teeth whitening gel. Remember to add some uninfected control.
b. Coomassie excellent blue staining Load 10 to 40 µg overall cell protein per lane for a one-dimensional SDS-polyacrylamide carbamide peroxide gel.
If the recombinant pathogen is not real, recombinant protein shall be detected only if it can be produced at huge levels in the actual infected cells.
c. Functional assays: Use any assay that is certainly typically used to help monitor the protein involving interest—e. g.,mobility-shift DNA-binding assays , within vitro kinase assays (for your protein kinase), nucleotide-binding assays(for any protein that binds nucleotides), as well as thymidine-incorporation assays (for your protein that is really a growth factor).
d. Metabolic labeling involving recombinant proteins: Perform as described.
6. Interpret results to recognize which of this putative recombinant stocks is surely an actual recombinant that produces the required protein.
Plaque-purify recombinants in order that they are free by any contaminating wild-type virus (if these were not produced with linearized baculoviral as well as bacmid DNA.
Prepare a considerable viral stock as well as titer the recombinant computer virus.
Related reading: Introduction To Quantitative Real-Time PCR Maintenance And Culture Of Insect Cells